Yuko Fabulicious Scan History
| Scan ID | Scan Type | Notes | Scaled? | |
|---|---|---|---|---|
| s00120090618 | 3D Anatomy | HiRes | 20jan10 | |
| s00220090622 | 3D Anatomy | HiRes | ||
| s00120090622 | Pilot Retinotopy | tested different tr, different te times | ||
| s00120090706 | Full Retinotopy | used optimal te = t2* | 01feb10, redo. not good dataset. makes dataset worse if averaged with s00120091009. | |
| s00120090805 | Pilot Retinotopy | tested longer te times | ||
| s00320090809 | Full Retinotopy | for Andy | ||
| s00420090825 | Full Retinotopy | for Andy | ||
| s00520090825 | Full Retinotopy | for Mauro | ||
| s00120090908 | Full Retinotopy | aborted | ||
| s00120091009 | Full Retinotopy | good full retinotopy | 21jan10 | |
| s00620091021 | Full Retinotopy | tested and used the mirror system | ||
| GRADIENT COIL REPLACEMENT scaling factor issue fixed 18jan10 | ||||
| Scan ID | Scan Type | Scan Details | Runs | Notes |
| | | wrong tr of 1.63s | skip 3,4 | trashing unles we decide to resample at 1.2s |
| s00120091216 | sdtDots vanilla | 2 sdtDotsLoc, 1 blockLoc, 10 vanilla co5% | all | reprocessed 26feb10, 2danat only, 8th run lost cardio signal halfway |
| s00120100106 | sdtDots vanilla | 1 sdtDotsLoc, 1 blockLoc, 9 vanilla co5%, 3D Anatomy retake | skip 8 | originally, 3danat.fid was not fffrted… justin's 3danat_proc.fid is moved to plain 3danat.fid in yuko's dir, reprocessed 26feb10 |
| s00120100112 | sdtDots vanilla | 1 sdtDotsLoc, 1 blockLoc, 9 vanilla co5%, 3D Anatomy retake | all | 3danatomical has funny wrapping - initialize alignment form header doesn't work. should align to 2d instead. pro setting may not have been correct, so 3d anat is skewed (corrected 20100216), stimfiles not linked, reprocessed 02mar10, dump 8thcar, stim2-13, fid00-11 |
| | | co7% forgot to save sdtDotsLoc, but we have 1 blockLoc, ended early, 3danat has only 57 slices | stimfile link nums unknown… skipping this session for now!!! | |
| s00120100126 | sdtDots mixed | pilot mixed 557 | skip 3,5,9 | |
| s00120100129 | sdtDots mixed | mixed 557, screwed up scan 7? | skip 7 | |
| s00120100202 | sdtDots mixed | mixed 557 | ||
| s00120100210 | sdtDots vanilla | vanilla 5% | only 6 vanilla runs and 1 sdtDots localizer and 1 block loc. sleepy for first couple of runs… good on the rest, i think, reprocessed 02mar10 | |
| s00120100216 | sdtDots vanilla | vanilla 5% | super awesome super awake super good run with 2 block localizers!!!!!!! | |
| s00120100223 | sdtDots vanilla | vanilla 5% | good scan. overall a little sleepier than before, but should be good. | |
| s00120100305 | 3D Anatomy | loadParams('yuko'), exp29,30 | 4 t1s, 2 t2s | |
| s00120100324 | MT localizer | localizer only | triggers didn't register and button presses were not working for first three scans, final scan (MT localizer, car/ext 8, stim 14) has good data, MotionComp scan 4 is GOOD | |
| s00120100330 | MT localizer, spatcon | localizer and spatcon | first 3 scans are MT localizers, last 8 are spatcons | |
| s01520100517 | 3D Anatomy | loadParams('yuko'), exp28,29,30 | 4 t1s, 1 t2 | |
| s01520100521 | Retinotopy | loadParams('retinotopy') | 14 good scans (messed up 13th, so redid), lots of movement of body during scan… | |
| s00120100611 | cuecon, 1 good cueconLoc | loadParams('cuecon') | contact lens popped out! during last run ~1mm shift | 1 localizer + 3 cuecon scans, slice plan too close to occipital tip - motion comp cropped out parts of occip tip |
| | phantom 2shot | didn't tranplan the correct number of slices, so 16 | messed up a lot of things - reference scan was not a reference scan (wrapped because wrong slice numbers), slice plan not transferred correctly | |
| s00120100621 | test 2shot, 2 good cueconLocs, 16slices | 2k2r (24 slices) vs 4k2r (16 slices) | params 'cuecon' and 'cuecon2k24' | retinotopy rings exp and cueconLoc (2 each) per sequence = 8 total scans. took only one noise scan with 16 slice dimensions, so sense reconstruction on both are 16 slices. results: retinotopy is slightly better/same between 16 and 24 shot, but cuecon is better in 16 slice. if cuecon was better in 24 slice, would definitely choose 24 slice… but stuck with 16. seemed like more distortion in occipital area with 2 shot |
| s00120100622 (1/5, 1.1) | cuecon, 1 good cueconLoc, 9 good cuecons | loadParams('cuecon') | 1 localizer, 1 manual threshold passed in (but this stim was not loaded in next run, so ignore this run), 9 cuecons | stim: 100621_stim13(1.1) |
| s00120100623 | cuecon, 2 good cueconLoc, 9 bad cuecons | loaded 100622_stim13 | loaded 100622_stim13, edited code to have equal freqs of each cue condition one two and four, BUT DIDN'T CONSIDER THE CASE WHERE WRONG PEDESTALS can be spliced. code is now fixed! [0.0625 0.125 0.50] tested on top of [0.125 0.25 0.50] from 100622 | phsychophysics, despite the bad splice, shows gradation between 3 cuecons. |
| s00120100624 (2/5, 1.2) | cuecon, 2 good cueconLoc, 8 good cuecons | loaded 100622_stim13 | got a little sick in this scan, adrian froze halfway, but no effect on data | stim: 100624_stim09(1.2) |
| s00120100625 (3/5, 1.3e) | cuecon, 2 good cueconLoc, 10 good cuecons | loaded 100624_stim09 | ok, somewhat sleepy in early scans, but awake after break | 100625_stim11(1.3) |
| s00120100629 | cuecon, 2 good cueconLoc, 10 good cuecons | loaded thresholds from 100625_stim11 | sleepy in first few runs, awake in the rest… but not as confident on this session as others | 100625_stim12(2.1) |
| s00120100630 | cuecon, 1 good cueconLoc, 1 bad cueconLoc, 10 good cuecons | loaded 100629_stim11 | restarted after 2 sleepy cuecon runs, but still sleepy from cuecon 3 to 8 | stim: 6thrun(8th) 100630_stim10(2.2) psychophysics doesn't look so bad, however. |
| s00120100812 (4/5, 3.1) | cuecon, 1 good cueconLoc, 8 good cuecons | loaded threshes from staircases | good scan | |
| s00120100813 (5/5, 3.2e) | cuecon, 1 good cueconLoc, 11 good cuecons | loaded stim11 | good scan | |
| s00720100916 (1/4, 2.2e) | cuecon, 2 cueconloc, 8 cuecons | loaded threshes based on outside scanner 100916_stim07, twocueWM | good performance! | |
| s00720100917 | cuecon, 2 cueconloc, 10 cuecons | loaded threshes based on outside scanner 100916_stim07, twocueWM | performance not so hot, kenji has confidence about lsat scan, but decreasing confidence the earlier the scan | |
| s00720100921 (2/4, 2.1) | cuecon, 2 cueconloc, 10 cuecons | |||
| s01220100921 | retinotopy | |||
| s00720100924 (3/4, 2.2e) | cuecon | |||
| s00720100927 (4/4, 1.2e) | cuecon | scans 6-9 has funny horizontal dark gray line… may be result of mask but the effect is not as visible in scans 1-5. | continued staircase of 0916 since we trashed 0917. this is the “latter half” of the first staircase | |
| | no epis - only up to anatomy | subject experienced pain in back of head | worked out different ways to pad the receiver coils to full in the gap. best to gum tape the two coils and insert the white velcro straps in the holsters… trying tomorrow without eye tracker. subject has very high nose… | |
| s00620100930 (1/4, 1.1) | cuecon | run by Kenji, Yuko absent | ||
| s00620101005 (2/4, 1.2) | cuecon | wrong nv!! need to process first 3 scans (1 loc, 2 cuecons) specially. last 3 scans (2 cuecons, 1 loc) are normal | ||
| s00620101006 (3/4, 1.2) | cuecon | 2 localizers, 8 cuecons | good scan! | |
| s00620101008 (4/4, 1.3) | cuecon | 2 localizers, 8 cuecons | good scan! | |
| s00620101015 (5/4, 1.4) | cuecon | 2 localizers, 8 cuecons | Kenji running this scan with Takeshi | |
| | subj accidentally forgot scan time | |||
| s00620101201 (6/4, 1.5) | cuecon | 2 localizers, 8 cuecons | car/ext file recorder updated to new OS, wiring changed and button presses aren't recognized well… support unit fixing problem before scan | |
| s00620101203 (7/4, 1.5) | cuecon | 1 localizers, 8 cuecons (1 wrong tr cuecon SKIP) | ||
| s01620101203 | retinotopy | 2 rings 2shot(fieldmap), 2 rings 4shot, 6 wedges | ||
| s01220101207 | cuecon1 | 1loc, 6cuecons | ||
| s01620101208 | cuecon | |||
| s01620101209 | cuecon | |||
| | terminated | |||
| s01620101215 | cuecon | |||
| s01220101215 | cuecon | 2 localizers, 8 cuecons | ||
| s01620101217 | cuecon | |||
| s01220101217 | cuecon | 2 localizers, 7 cuecons | ||
| s01620101220 | cuecon | |||
| s01220101221 | cuecon | 2 localizers, 7 cuecons | ||
| s00520110131 | cuecon | |||
| s00520110201 | cuecon | |||
| s01220110201 | cuecon | |||
| s00520110204 | cuecon | |||
| s00520110210 | cuecon | |||
| s00520110214 | retinotopy | |||
| s00520110215 | cuecon | |||
bold means processed.